May 21-23, 2018 AT UC Berkeley
Monday
- Introduction (talk)
- Logging In and transferring files (hands on)
- Intro to command-line (hands on)
- What is Bioinformatics? (talk)
- Sequencing technologies (talk, Shana)
- Microbial community amplicons (talk, Dylan)
- Installing Software (hands on)
Tuesday
- Running jobs on the Cluster and using modules (homework)
- dbcAmplicons: Amplicons (materials)
- dbcAmplicons: Bioinformatics (materials)
- dbcAmplicons: Data processing (hands on)
- dbcAmplicons: Data processing - all amplicons (homework)
Wednesday
- Intro to R (hand on)
- Experimental Design n Microbial Sequencing (talk)
- MCA Analysis in phyloseq (hands on)
- Closing thoughts (talk)
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