Quick Introduction to the Workshop and Core

The mission of the Bioinformatics Core facility is to facilitate outstanding omics-scale research through these activities:

Staff

Contacts

• Bioinformatics related questions, include but not limited to bioinformatic methods questions, software use, data questions.
  • Bioinformatics.core@ucdavis.edu
• Computing Issues, include but not limited to user account questions, equipment failure/malfunction, software install, software failures (not related to use)
  • helpdesk@genomecenter.ucdavis.edu
• Training courses information
  • training.bioinformatics@ucdavis.edu

Workshop Goals

• End to End understanding of Variant Analysis
  • Discussions/lectures
  • Technologies
  • Experimental design
  • Cost estimation
  • Workflow
• To work through a complete experiment, starting from raw data to completion, including making a few figures.
• Goal is 30-40% lecture/discussion 60-70% hands-on

Workshop Materials

Workshop materials are all posted on github, and publicly available

http://bioinformatics.ucdavis.edu/training/events/

• Github main page:

  https://github.com/ucdavis-bioinformatics-training

• This Workshop

  https://ucdavis-bioinformatics-training.github.io/2019-Alliance-for-Global-Health-and-Science-Makerere-University_Variants

  https://github.com/ucdavis-bioinformatics-training/2019-Alliance-for-Global-Health-and-Science-Makerere-University_Variants