Quick Introduction to the Workshop and Core

The mission of the Bioinformatics Core facility in the UC Davis Genome Center is to facilitate outstanding omics-scale research through these activities:

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Staff

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Contacts

Workshop Goals

Internet

You will need to access the ESALQ wireless via your laptop to participate in the hands-on exercises.

Workshop Materials

Workshop materials are all posted on github, and publicly available:

http://bioinformatics.ucdavis.edu/training/events/

https://github.com/ucdavis-bioinformatics-training

Computing Cluster

Course will be conducted using the Bioinformatics Core’s servers and compute cluster tadpole.genomecenter.ucdavis.edu

Everyone should get an account.
https://computing.genomecenter.ucdavis.edu

  1. Request an account -> sponsor “Bioinformatics Core Workshop”.
    • Fill in the remainder of the information, select any username you wish
    • If you already have an account on our systems, then please tell us your username.
  2. Confirm your email address in your email application
  3. I will need to approve your account.
  4. You will get an email to set your password
  5. Test your account, in terminal ssh yourusername@tadpole.genomecenter.ucdavis.edu
    • Use the username you chose.

Cluster usage will be under the slurm reservation ‘workshop’

Reservation will last 1 full week.

**workshop ACTIVE 2019-04-22 2019-04-28