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      Advanced Topics in Single Cell RNA-Seq: scATAC Analysis

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Introduction and Lectures
Intro to the Workshop and Core
Schedule
What is Bioinformatics/Genomics?
Experimental Design and Cost Estimation
Support
Slack
Zoom
Cheat Sheets
Software and Links
Scripts
Files and Filetypes
Prerequisites
CLI
R
scATAC
Data Reduction
Data Analysis
ETC
Closing thoughts
Workshop Photos
Github page
Biocore website

Slurm script for cellranger counts

Cellranger counts

Bash script (loop) for cellranger counts

Cellranger counts