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      Metagenomics and Metatranscriptomics

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Introduction and Lectures
Intro to the Workshop and Core
Schedule
What is Bioinformatics/Genomics?
Overview
Support
Slack
Zoom
Cheat Sheets
Software and Links
Scripts
Prerequisites
Logging In
CLI
Cluster Computing
R
Data Analysis
Files and Filetypes
Prepare dataset
Preprocessing raw data
Metagenomics data analysis
Metatranscriptomics data analysis
Integrate two data types
ETC
Closing thoughts
Workshop Photos
Github page
Biocore website

Software and Links

Linux Terminal:

  1. Shell for Windows 10 tutorial
  2. Enable SSH tutorial OR
  3. MobaXterm
  4. PuTTY

R and RStudio

  1. R project
  2. RStudio Desktop Also see this link if you have trouble installing under Ubuntu