Schedule
All posted times are Pacific time zone. At least one break will be provided each morning and afternoon.
Monday, June 14
| 8:50 am | Zoom session starts |
| 9:00 am | Introduction to the workshop and the Core |
| 9:45 am | Getting set up |
| 10:00 am | Command Line Prerequisites / Review |
| 11:00 am | Break |
| 11:10 am | Files and file types |
| 12:00 pm | Lunch |
| 1:00 pm | Technology Talk by Lutz F. |
| 3:00 pm | Prepare dataset |
| 5:00 pm | Zoom session ends |
Tuesday, June 15
| 8:50 am | Zoom session starts |
| 9:00 am | Preprocessing raw data |
| 12:00 pm | Lunch |
| 4:00 pm | Indexing a Genome |
| 5:00 pm | Zoom session ends |
Wednesday, June 16
| 8:50 am | Zoom session starts |
| 9:00 am | Alignment with STAR |
| 12:00 pm | Lunch |
| 1:00 pm | Generating counts tables |
| 3:00 pm | Prepare R for Analysis |
| 4:00 pm | What is Bioinformatics? |
| 5:00 pm | Zoom session ends |
Thursday, June 17
| 8:50 am | Zoom session starts |
| 9:00 am | R Prerequisites / Review |
| 12:00 pm | Lunch |
| 1:00 pm | Experimental Design |
| 2:00 pm | Differential Expression Analysis |
| 5:00 pm | Zoom session ends |
Friday, June 18
| 8:50 am | Zoom session starts |
| 9:00 am | Differential Expression Analysis |
| 12:00 pm | Lunch |
| 1:00 pm | Enrichment |
| 3:30 pm | Comparison: STAR vs Salmon |
| 5:00 pm | Zoom session ends |