UC Davis Genome Center Bioinformatics Core
Introductory Command line and cluster
- Logging In and transferring files
- Intro to command-line
- Running jobs on the Cluster and using modules
Intro to Sequencing (talk)
Experimental Design and Cost Estimation (talk)
Data Reduction
- Files and Filetypes for RNA-Seq
- Project Setup
- Preprocessing Data
- Aligners
- Generating Summarized Counts