| Home | Introduction |
|---|
| Introduction to the Workshop and the Core |
| Schedule |
| What is Bioinformatics/Genomics? |
| Some Experimental Design? | Support |
| Slack |
| Zoom |
| Cheat Sheets |
| Software and Links |
| Scripts | Prerequisites |
| Introduction to the Command Line |
| Introduction to R |
| High Performance Computing | Data Reduction ChIPseq/ATACseq |
| Filetype Description |
| ChIP and ATAC project setup |
| Preprocessing Reads |
| Mapping Reads |
| Filtering Reads |
| Peak Call with MACS2 | Data Analysis ChIPseq/ATACseq |
| Differential ChIPseq |
| Differential ATACseq |
| R Package Installation | Methylation |
| Introduction to WGBS |
| WGBS hands-on | ETC |
| Closing thoughts |
| Workshop Photos |
| Github page |
| Biocore website |