☰ Menu

      PacBio Iso-Seq Workshop Online

Home
Introduction
Intro to the Workshop
Schedule
Support
Using Slack in this workshop
Using Zoom in this workshop
Cheat Sheets
Software and Links
Talks
Perspective on Bioinformatics/Genomics?
Iso-Seq Library Prep
Prerequisites
Logging In
CLI
Cluster Computing
Data Reduction
PacBio data
Dr. Liz Tseng
Introduction to PacBio and Iso-Seq
Using the Iso-Seq Application on SMRT Link and BioConda
Tutorial
Richard Kuo
Transcriptome Annotation by Modular Algorithms TAMA
Tutorial
Fairlie Reese
Long-read RNA-seq transcriptomic analysis with TALON and Swan
Tutorial
Download ipython notebook
Conesa Lab
IsoAnnot and IsoAnnotLite
TappAS Install
Hands-on tappAS
ETC
Closing thoughts
Recordings
Github page
Biocore website
Pacific Biosciences website
Conesa lab website

Reference Cheat Sheets

Unix

Introduction to RStudio

Introduction to R

Data Import/Transformation and Visualization

R Markdown