☰ Menu

      Single Cell RNA-Seq Analysis

Home
Introduction and Lectures
Intro to the Workshop and Core
Schedule
Talk by Diana Burkhat-Waco from 10x Genomics
What is Bioinformatics/Genomics?
Experimental Design and Cost Estimation
Support
Zoom
Slack
Cheat Sheets
Software and Links
Scripts
Prerequisites
CLI
R
Data Reduction
Project setup
Generating Expression Matrix
scRNAseq Analysis
Prepare scRNAseq Analysis
scRNAseq Analysis - PART1
scRNAseq Analysis - PART2
scRNAseq Analysis - PART3
scRNAseq Analysis - PART4
scRNAseq Analysis - PART5
scRNAseq Analysis - PART6
Shiny App Data Explore
Shiny App on AWS (extra)
ETC
Closing thoughts
Github page
Biocore website

Closing Thoughts

The forest through the trees.

flowchart2

Be Consistent

Prerequisites for bioinformatics

The bottom line

Next Steps

My recommendation is to follow all of the instructions again, from the beginning on your own and send emails to training.bioinformatics@ucdavis.edu And we will be responsive to answering questions

Upcoming Workshops

Continue pursuing single cell RNA-Seq analysis with one of our advanced topics single-day workshops, or explore another type of experiment with one of our other offerings.

Previous Workshops available online

If you would like to take a look at the documentation from previous workshops.

Questions?

Contact us at training.bioinformatics@ucdavis.edu

If you receive email directly from training.bioinformatics@ucdavis.edu, you are currently subscribed to one of our announcements lists. To subscribe / unsubscribe from the Bioinformatics Core email lists, please follow the instructions at the bottom of http://bioinformatics.ucdavis.edu/contact-us/.