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        Sept. 2019 Microbial Community Analysis Workshop

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Introduction and Lectures
Intro to the Workshop and Core
What is Bioinformatics?
Experimental Design and Cost Estimation
Introduction to Command-Line and the Cluster
Logging in and Transferring Files
Intro to Command-Line
Advanced Command-Line (extra)
Running jobs on the Cluster and using modules
Intro to R and Rstudio
Getting Started
Intro to R
Prepare Data in R (extra)
Data in R (extra)
dbcAmplicons
dbcAmplicons Installing Software
dbcAmplicons - Amplicons talk
dbcAmplicons - Bioinformatics talk
Dataset and Metadata
dbcAmplicons - Data processing
dbcAmplicons w/Dada2
Coming soon
Microbial Community Analysis in R
Prepare MCA Analysis
MCA Analysis in phyloseq
Support
Cheat Sheets
Software and Links
Scripts
ETC
Closing thoughts
Workshop Photos
Github
Biocore website