| Home | Introduction and Lectures |
|---|
| Intro to the Workshop and Core |
| What is Bioinformatics? |
| Experimental Design and Cost Estimation | Introduction to Command-Line and the Cluster |
| Logging in and Transferring Files |
| Intro to Command-Line |
| Advanced Command-Line (extra) |
| Running jobs on the Cluster and using modules | Intro to R and Rstudio |
| Getting Started |
| Intro to R |
| Prepare Data in R (extra) |
| Data in R (extra) | dbcAmplicons |
| dbcAmplicons Installing Software |
| dbcAmplicons - Amplicons talk |
| dbcAmplicons - Bioinformatics talk |
| Dataset and Metadata |
| dbcAmplicons - Data processing | dbcAmplicons w/Dada2 |
| Coming soon | Microbial Community Analysis in R |
| Prepare MCA Analysis |
| MCA Analysis in phyloseq | Support |
| Cheat Sheets |
| Software and Links |
| Scripts | ETC |
| Closing thoughts |
| Workshop Photos |
| Github |
| Biocore website |